PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun011997 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | B3 | ||||||||
Protein Properties | Length: 104aa MW: 12495.4 Da PI: 10.0878 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.2 | 1.2e-12 | 47 | 102 | 41 | 97 |
TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 41 esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ + W +++++++s+ +++t GWk+F+k n+L +gD + F d++++ v++v+ Vun011997 47 STPKFWPCRIRWTRRSSFeCYMTCGWKRFCKNNQLAAGDELKFVIDNQQK--NVIHVL 102 33489*******5555555*************************765444..466665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 10.503 | 9 | 104 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.4E-9 | 25 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.94E-10 | 25 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 7.6E-10 | 47 | 101 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence Send to blast |
MSLTKRFSFN NFFQSSVMFM DPSEYLHSDF ARQFLENGCR RSFITISTPK FWPCRIRWTR 60 RSSFECYMTC GWKRFCKNNQ LAAGDELKFV IDNQQKNVIH VLKV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027920920.1 | 1e-25 | uncharacterized protein LOC114178963 | ||||
Refseq | XP_027922569.1 | 8e-26 | uncharacterized protein LOC114180428 | ||||
TrEMBL | A0A4D6LUT7 | 7e-46 | A0A4D6LUT7_VIGUN; Uncharacterized protein |