PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun011548 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | Trihelix | ||||||||
Protein Properties | Length: 140aa MW: 16274.6 Da PI: 5.3219 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 42.8 | 1.4e-13 | 2 | 72 | 14 | 84 |
trihelix 14 rremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 r eme+r+ + g++++ Wee++ km+ g+ers+ kekwe+ +++ ++ k+g+kkr +e+s+ c yfd+ Vun011548 2 RAEMETRYMQsGCSEEFMWEEIATKMACFGYERSALVFKEKWESTRNYARNAKDGNKKR-KEDSRGCFYFDN 72 678898877538**********************************************8.88999*****86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.4E-7 | 5 | 72 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
XRAEMETRYM QSGCSEEFMW EEIATKMACF GYERSALVFK EKWESTRNYA RNAKDGNKKR 60 KEDSRGCFYF DNSEQSSLYN QGGTYCDIND QRHERRLQND GSSPSNSNVA GDNCFPFLMT 120 EGANLWENYS LKVNKASQNQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027931315.1 | 7e-98 | trihelix transcription factor PTL | ||||
TrEMBL | A0A4D6MDA1 | 2e-96 | A0A4D6MDA1_VIGUN; Uncharacterized protein | ||||
STRING | XP_007162858.1 | 2e-89 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 3e-24 | Trihelix family protein |