PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun011277 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | AP2 | ||||||||
Protein Properties | Length: 156aa MW: 16730.3 Da PI: 4.6583 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 21.8 | 4.5e-07 | 4 | 28 | 32 | 56 |
AP2 32 slgkfgtaeeAakaaiaarkklege 56 +lg+f t+eeAa+a++ a+ k++g+ Vun011277 4 YLGTFATEEEAAEAYDIAAIKFRGA 28 8*********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.5E-5 | 1 | 41 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 12.905 | 1 | 35 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-9 | 3 | 36 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.3E-12 | 3 | 35 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence Send to blast |
XDLYLGTFAT EEEAAEAYDI AAIKFRGASA VTNFEMNRYD VENILNSSLP VGGVAKRLKL 60 SSPESEKKNL VGSTNEQPQG TNESSTINFS AIQPVASIPY DSANAYPQNL LHHFHHSSGG 120 SSSVQESAAI VTNATSLTIL PPPPVPGFFL WPPQSF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027917545.1 | 1e-107 | AP2-like ethylene-responsive transcription factor AIL6 | ||||
Refseq | XP_027917546.1 | 1e-107 | AP2-like ethylene-responsive transcription factor AIL6 | ||||
TrEMBL | A0A1S3TG47 | 1e-79 | A0A1S3TG47_VIGRR; AP2-like ethylene-responsive transcription factor AIL6 | ||||
STRING | XP_007156467.1 | 1e-65 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.2 | 2e-20 | AINTEGUMENTA-like 6 |