PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun010944 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | Trihelix | ||||||||
Protein Properties | Length: 170aa MW: 20037.6 Da PI: 4.3871 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 79.5 | 4.9e-25 | 4 | 63 | 27 | 87 |
trihelix 27 kkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 k+plWe++s+ m + g++rs+k+Ckekwen+nk++kk+ke++k r e+s+tcpyf++l+a Vun010944 4 KAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESNKHR-RENSKTCPYFHELDA 63 89*****************************************87.78889********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.017 | 1 | 35 | IPR017877 | Myb-like domain |
CDD | cd12203 | 1.11E-16 | 2 | 42 | No hit | No description |
Pfam | PF13837 | 2.8E-17 | 5 | 64 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
XGPKAPLWED ISAGMLRLGY NRSAKRCKEK WENINKYFKK VKESNKHRRE NSKTCPYFHE 60 LDAIYREKSK SQNPFGASFL NMKAHEMMEP LMVQPEQQWR PPSQYEQGAA KENSESEYER 120 KEREEEEEED DEEEVEEDEN EEGDLESVED EGGNRYEIAT NKLSSVDTVE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027936531.1 | 1e-117 | trihelix transcription factor GT-2-like | ||||
Swissprot | Q39117 | 7e-35 | TGT2_ARATH; Trihelix transcription factor GT-2 | ||||
TrEMBL | A0A4D6N2V3 | 1e-116 | A0A4D6N2V3_VIGUN; Uncharacterized protein | ||||
STRING | GLYMA10G36950.1 | 6e-84 | (Glycine max) | ||||
STRING | XP_007143537.1 | 2e-82 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-39 | Trihelix family protein |