PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun009396 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | Trihelix | ||||||||
Protein Properties | Length: 232aa MW: 27144.7 Da PI: 10.3358 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 25.8 | 2.8e-08 | 7 | 45 | 46 | 86 |
trihelix 46 spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 s+k+Ckek+en+ k+ k++ke+++++ + +t+++fdql+ Vun009396 7 SAKKCKEKFENVYKYNKRTKENKSGK--SHGKTYKFFDQLQ 45 89*******************99996..55667******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
XFFFFLSAKK CKEKFENVYK YNKRTKENKS GKSHGKTYKF FDQLQALENH QFTISYPSKP 60 QPTLATTNTL TLPARQSDHG NNNVISYVTP FPSTNPTHIS PSPQPNTDTT TVSTTNRRDT 120 SPPQTTATNT NNTNNDNVTY SLPNMNTPFS TTTTTTTSTS SSTASDEDLE ERYRRKRKWK 180 DYFRRLTRKV LLKQEEMQMK FLEAMDKRER ERVAQQDNWR MQEMARMNRE HX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014516655.1 | 1e-112 | trihelix transcription factor GT-2-like isoform X1 | ||||
Refseq | XP_014516663.1 | 1e-113 | trihelix transcription factor GT-2-like isoform X2 | ||||
TrEMBL | A0A4D6M0G9 | 1e-160 | A0A4D6M0G9_VIGUN; Uncharacterized protein | ||||
STRING | XP_007152025.1 | 1e-101 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-17 | Trihelix family protein |