PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun009332 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26242.7 Da PI: 5.7121 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.4 | 5.2e-13 | 118 | 169 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+ Vun009332 118 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YIQRGDQASIIGGAINFVKELE 169 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.95E-13 | 116 | 173 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.8E-13 | 116 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.71E-16 | 117 | 180 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.434 | 117 | 168 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.0E-10 | 118 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.8E-9 | 123 | 174 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MALEAVVFPQ SQDPFGGYGS VKDFYNCTFL AATSPNWGDY EHININIDKE EEQGSISTFL 60 DNNNNNPYGG DWTSSSSSIL PHFNELQETT DPSNTTLTTR PKRRRAKSRK NKEEIENQRM 120 THIAVERNRR KQMNEYLSVL RSLMPDSYIQ RGDQASIIGG AINFVKELEQ RLHFLGAQKE 180 GEAKSDAGGG GSEXFCDRSE DVGEVKSGIA DIEVTMVESH ANLKIRSKKR PNNS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 129 | RMTHIAVERNRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027934017.1 | 1e-160 | transcription factor bHLH94-like | ||||
TrEMBL | A0A4D6N270 | 1e-159 | A0A4D6N270_VIGUN; Transcription factor MYC2 | ||||
STRING | XP_007144754.1 | 1e-143 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 5e-49 | bHLH family protein |