PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun009142 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 28083.6 Da PI: 9.0011 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.5 | 8.9e-52 | 20 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtd+elv++yL++k++++++ + +ike+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + e+ Vun009142 20 LPPGFRFHPTDDELVNHYLCRKCAAQSIAA-PIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PEAR 116 79*************************999.88***************6666689*************************************98..6789 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy g+apkg+kt+W+mheyrl Vun009142 117 GIKKALVFYAGKAPKGVKTNWIMHEYRL 144 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.09E-61 | 14 | 171 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.279 | 20 | 171 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-27 | 21 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
EERQRKLEKR ETGMQGELEL PPGFRFHPTD DELVNHYLCR KCAAQSIAAP IIKEIDLYKF 60 DPWQLPDMAL YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPI GKPEARGIKK 120 ALVFYAGKAP KGVKTNWIMH EYRLANVDRS ASKKNNNLRL DDWVLCRIYN KKGKIEKYNN 180 VDGVVEQKPA KLPEEILFQH EMKPEIQMYD HDHFRNNQLY MDTSDSVPRL NTDSSCSEHV 240 X |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-84 | 9 | 177 | 4 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027919983.1 | 1e-172 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-109 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A4D6L8S8 | 1e-170 | A0A4D6L8S8_VIGUN; Uncharacterized protein | ||||
STRING | XP_007159873.1 | 1e-159 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-111 | NAC family protein |