PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun008848 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | FAR1 | ||||||||
Protein Properties | Length: 251aa MW: 28875.5 Da PI: 5.8209 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.3 | 2.2e-27 | 78 | 166 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k ++ r++ra+tr gCka++++k ek+gkw++tk++++HnH+l+ Vun008848 78 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLV 166 9**************************************999999989***************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 2.2E-25 | 78 | 166 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MESQLVDQND AMEVSGDVDL STYEVQVDQE TYEVDPNEGC RVLESSSGGE LGICDDDHAI 60 QEPYEGMEFE SEDAAKIFYD EYARRVGFVM RVMSCRRSER DGRILARRLG CNKEGYCVSI 120 RGKFSSVRKP RASTREGCKA MIHIKYEKSG KWVITKFVKD HNHPLVVSPR EARQTMDEKD 180 KKIQELTAEL RHKKRLCATY QEQLTSFMKV VEEHNEKLST KIHLVVNNLK EFESIDEVLH 240 QTAANHVVVD H |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014498549.1 | 1e-179 | protein FAR1-RELATED SEQUENCE 5 isoform X1 | ||||
Refseq | XP_014498550.1 | 1e-179 | protein FAR1-RELATED SEQUENCE 5 isoform X1 | ||||
TrEMBL | A0A1S3TXR2 | 1e-178 | A0A1S3TXR2_VIGRR; protein FAR1-RELATED SEQUENCE 5 isoform X1 | ||||
STRING | XP_007148636.1 | 1e-176 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-106 | FAR1 family protein |