PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun008537 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bHLH | ||||||||
Protein Properties | Length: 264aa MW: 29235 Da PI: 9.9587 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.5 | 5.8e-14 | 78 | 124 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L ++e++k+L Vun008537 78 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVIEHVKDL 124 79*************************8.....7****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.402 | 75 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.2E-11 | 78 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.7E-15 | 78 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.14E-9 | 78 | 127 | No hit | No description |
SuperFamily | SSF47459 | 5.76E-13 | 78 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-11 | 81 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 0.00481 | 171 | 206 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
PLFTLVRGRV SDMRKYLCRN CEGRRMITAL SPGGAHVPAR IIVVLQVTDS ASLQFGEFHS 60 WPLPIEGAAE DRAMSASKSH SQAEKRRRDR INAQLATLRK LIPKSDKMDK AALLGSVIEH 120 VKDLKRKAMD VSRAFTVPTE IDEVSIDCDH VEDESCTKVN KLKENIVIKA SVCCDDRPEL 180 FPELIQVLKG LRLTAVKADI ASVGGRIKSK LVLCSKDSEE GVCLTTLKQS LKSAVTKIAS 240 SSMTSNCPTR SKRQRFFLPS RCLQ |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by salicylic acid (SA) treatment. {ECO:0000269|PubMed:12679534}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027914056.1 | 1e-156 | transcription factor bHLH51-like | ||||
Swissprot | Q9XEF0 | 8e-46 | BH051_ARATH; Transcription factor bHLH51 | ||||
TrEMBL | A0A4D6MB23 | 1e-155 | A0A4D6MB23_VIGUN; Transcription factor MYC2 | ||||
STRING | XP_007163561.1 | 1e-152 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 3e-48 | bHLH family protein |
Publications ? help Back to Top | |||
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