PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun008403 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | NAC | ||||||||
Protein Properties | Length: 270aa MW: 30170.1 Da PI: 9.437 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.6 | 1.2e-19 | 2 | 55 | 77 | 128 |
NAM 77 atksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 atk+gyWkatgkd++v+++ ++++g +ktLvfy grap g +tdWvmheyrl Vun008403 2 ATKAGYWKATGKDRKVVCQsnPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRL 55 699**************98666778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 27.897 | 1 | 78 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-9 | 2 | 55 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.57E-23 | 2 | 78 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
XATKAGYWKA TGKDRKVVCQ SNPSNVTGYR KTLVFYAGRA PLGDRTDWVM HEYRLCDDLG 60 QPTPSFQGGF ALCRVIKKNE KASATKGENK GKRAGSSSIN GSDTSVRFSG EPFSNSGDSS 120 SHASQLNNES RYSSPITSPY NVAPMGEINQ ASLETNPSNF WISRDMILDS SKELFLIYSM 180 PVAEYFPRYD LPKYGDTMAI SGTFRNSIWF LPTQMSMEKL NLLILSVKLA ACHLTQENGI 240 PWTSMEMVEM SLMKIMIKLT QSRIRDPFKI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-12 | 5 | 83 | 95 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-12 | 5 | 83 | 95 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-12 | 5 | 83 | 95 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-12 | 5 | 83 | 95 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swm_B | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swm_C | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swm_D | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swp_A | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swp_B | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swp_C | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
3swp_D | 1e-12 | 5 | 83 | 98 | 173 | NAC domain-containing protein 19 |
4dul_A | 1e-12 | 5 | 83 | 95 | 170 | NAC domain-containing protein 19 |
4dul_B | 1e-12 | 5 | 83 | 95 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027920378.1 | 1e-127 | NAC domain-containing protein 71 | ||||
TrEMBL | A0A4D6L0U8 | 1e-126 | A0A4D6L0U8_VIGUN; Uncharacterized protein | ||||
STRING | XP_007155764.1 | 1e-118 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 5e-41 | NAC domain containing protein 71 |