PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun007814
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB
Protein Properties Length: 313aa    MW: 33956.1 Da    PI: 9.4086
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-3459PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.86.7e-203681147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l ++v+++G+++W++I+r ++ gR++k+c++rw + 
        Vun007814 36 KGPWSPEEDEALQKLVERHGPRNWSLISRSIP-GRSGKSCRLRWCNQ 81
                     79******************************.***********985 PP

2Myb_DNA-binding544e-1790132347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEd+ +++a++++G++ W+tIar +  gRt++ +k++w++ 
        Vun007814  90 AFTPEEDDTIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 132
                      79******************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.5283186IPR017930Myb domain
SuperFamilySSF466892.95E-3233129IPR009057Homeodomain-like
SMARTSM007171.9E-173584IPR001005SANT/Myb domain
PfamPF002496.0E-193681IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.2E-263789IPR009057Homeodomain-like
CDDcd001671.09E-163880No hitNo description
SMARTSM007172.9E-1487135IPR001005SANT/Myb domain
PROSITE profilePS5129420.75788137IPR017930Myb domain
CDDcd001671.23E-1190133No hitNo description
Gene3DG3DSA:1.10.10.604.0E-2390136IPR009057Homeodomain-like
PfamPF002491.3E-1490132IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
XNNSTRETLP HSLHQAKQQH SNIMMAVSRK DMDRIKGPWS PEEDEALQKL VERHGPRNWS  60
LISRSIPGRS GKSCRLRWCN QLSPQVEHRA FTPEEDDTII RAHARFGNKW ATIARLLSGR  120
TDNAIKNHWN STLKRKCSSI MMAEDPAAAA AGFSPQPLKR SVSAGAALPP GSPSGSDVSE  180
TSAPGVVSPS HVFRPVPVRP VVETASSCDD GPTTSLSLSL PGVESSEASN RATAMQANPF  240
TIAPVSTVAT PAAEVGMGAL NLSAEFMAVM HEMIKKEVRS YMEQQQQSAM CFQGVDGFRN  300
VSVKRIGISR VDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C1e-40351373105C-Myb DNA-Binding Domain
1msf_C1e-40351373105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027920587.10.0transcription factor MYB44-like
SwissprotO231602e-95MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A4D6KY770.0A0A4D6KY77_VIGUN; Myb proto-oncogene protein
STRINGXP_007155887.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.15e-92myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]