PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun006304 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bHLH | ||||||||||||
Protein Properties | Length: 147aa MW: 16380.4 Da PI: 4.2505 | ||||||||||||
Description | bHLH family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17 | 1.1e-05 | 3 | 41 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 rRR+++ +++eLr++ + a ++Ka+i A++YI +L Vun006304 3 SRRRRNMQRRLQELRRVTNSsA-------VNKASIIVDATRYIEEL 41 69**************988844.......9*************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.05E-7 | 4 | 60 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.5E-8 | 4 | 61 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS51671 | 8.619 | 78 | 147 | IPR002912 | ACT domain |
CDD | cd04873 | 2.00E-6 | 87 | 143 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MDSRRRRNMQ RRLQELRRVT NSSAVNKASI IVDATRYIEE LKQKVDGLNS ELGTAESSIS 60 QGELPMVTVE TLERGFLINV FSERNCPGML AAILDAFEEL GLDVLDARVS CEDTFQLEAV 120 GGESEENESI DAQVVKQAVM QAIQNMD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027907020.1 | 1e-102 | uncharacterized protein LOC114166482 | ||||
TrEMBL | A0A4D6MQ63 | 1e-101 | A0A4D6MQ63_VIGUN; Myc-type | ||||
STRING | XP_007134819.1 | 1e-95 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 5e-06 | beta HLH protein 93 |