PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005959
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 165aa    MW: 18364.5 Da    PI: 8.9855
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45805602PU_refUnigeneView CDS
PUT-167a-Vigna_unguiculata-26263PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.3e-143391563
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
               ++ +r+++NRe+ArrsR RK++ ++ L+  v +L +eN++    ++  ++++ ++k+e+
  Vun005959 33 RKRKRMISNRESARRSRMRKQKHLDDLASLVTQLRSENHQILTSVNLTTQKYLAVKAEN 91
               6789************************************************9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-112381No hitNo description
SMARTSM003382.6E-182993IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5193194IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.66E-123384No hitNo description
PfamPF001704.2E-113390IPR004827Basic-leucine zipper domain
CDDcd147021.57E-203484No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
AVHMASSSGT SSGSSLLQNS GSEEDLQAVM DERKRKRMIS NRESARRSRM RKQKHLDDLA  60
SLVTQLRSEN HQILTSVNLT TQKYLAVKAE NSVLRAQVSE LSHRLESLNE INHFLNSTNG  120
VFGPPGPSPT SFFEPEGSST FFNNNPFNMA YLSQPIMASA DMLQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13253RKRKRMISNRESARRSRMRKQK
24552RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027904566.11e-115bZIP transcription factor 11-like
SwissprotC0Z2L53e-46BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A4D6NXR21e-114A0A4D6NXR2_VIGUN; Extracellular signal-regulated kinase 1/2
STRINGXP_007135953.13e-95(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.12e-43G-box binding factor 6
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]