PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun005081 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | FAR1 | ||||||||||||
Protein Properties | Length: 199aa MW: 23010.2 Da PI: 8.3262 | ||||||||||||
Description | FAR1 family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.1 | 1.9e-25 | 43 | 132 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYAk+ GF vr ++ ++s+ +++i++r+f C+k+g++ + ++kt+ +++r++ r gC+a++ vk +k gkw+vtk+++eH+H l+ Vun005081 43 NFYDEYAKHEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVNKFGKWVVTKFVKEHSHLLN 132 6*******************************************9999***************************************885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.0E-22 | 43 | 132 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MDLEAVAETV VNSTDQISAA LEGNSIGEPN VGMEFESEEA AKNFYDEYAK HEGFVVRLDR 60 CHRSEVDNRI ISRRFSCNKQ GFHVRVRNKT KPVHKPRTSI REGCEAMMLV KVNKFGKWVV 120 TKFVKEHSHL LNASGSPSYS KMIESKDRII QQLTKELEYR DRLCQQYRRQ LFSLLETVEE 180 QTESLSKNVE LVVNNIKNL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027907007.1 | 1e-146 | protein FAR1-RELATED SEQUENCE 12-like isoform X1 | ||||
Refseq | XP_027907008.1 | 1e-146 | protein FAR1-RELATED SEQUENCE 12-like isoform X2 | ||||
TrEMBL | A0A0S3SWK0 | 1e-139 | A0A0S3SWK0_PHAAN; Uncharacterized protein | ||||
STRING | XP_007134265.1 | 1e-137 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-55 | FAR1 family protein |