PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003157
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 270aa    MW: 30196.5 Da    PI: 8.8788
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45824839PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-12962PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72e-1382128354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                ++h+++E+rRRdriN  +++Lr+l+P +      K++Ka+ L  +ve++k+L
  Vun003157  82 KSHSQAEKRRRDRINAQLATLRKLIPMS-----DKMDKAALLGSVVEHVKDL 128
                79*************************8.....7****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.17379128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-1182128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.14E-1082131No hitNo description
SuperFamilySSF474594.84E-1382132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-1582131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-1185134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
XQNQTQALEW SLIIVHMESY HYSGWPLPTN MPHCNSAPNS DQLSPFSLPL ASSDPPSLQF  60
SDFPLWPATI AEDKDRVASA SKSHSQAEKR RRDRINAQLA TLRKLIPMSD KMDKAALLGS  120
VVEHVKDLKR KAMCVSKAIT VPTETDEVTI EFHEAEDESF RKVKIWKEKI IIKASVCCDD  180
RPEVFPELIQ VLKGLRLTAV KADIASVGGR IKSILVLCSK DSDDNSVCLT TLKHSLKSAV  240
NKIASLSVAT NCPTRSKRQR FFFPSHYVHP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027939703.10.0transcription factor bHLH51-like isoform X2
TrEMBLA0A4D6MMI91e-174A0A4D6MMI9_VIGUN; Transcription factor MYC2
STRINGXP_007141752.11e-164(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-46bHLH family protein