PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003106
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 273aa    MW: 30354.5 Da    PI: 7.2814
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45809353PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-33315PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.61.6e-392181262
     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
               +e+alkcprCdst tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk+++ss
  Vun003106 21 PEQALKCPRCDSTSTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKKRSSS 81
               6899*****************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-271978IPR003851Zinc finger, Dof-type
PfamPF027013.5E-332379IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9472579IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102763IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MDPSCEQPQQ MSVEKKPRPN PEQALKCPRC DSTSTKFCYY NNYSLSQPRY FCKSCRRYWT  60
KGGTLRNVPV GGGCRKKRSS SSSSSSFKRD NDQSFTPNLN PLTTFPQLCY GSNDFTLALA  120
RLQKQASGQL GYNDHEISGV GNPTGSFSDM NPYSEHPSFL DAIRSGFLET QNHLQNLYYM  180
YGNGDIGEVD NGNSGGVGIS EEMMLPYNQV MNNAATQSVS ALLKQEQCGG SEQFKQWQLN  240
ADTNNGEIDS GRAIQSWNSF SSSWHGLLQS PLM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027926860.10.0dof zinc finger protein DOF5.3-like
TrEMBLA0A4D6N6660.0A0A4D6N666_VIGUN; Uncharacterized protein
STRINGXP_007150234.11e-157(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-40TARGET OF MONOPTEROS 6