PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002479
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 301aa    MW: 33848.4 Da    PI: 10.0851
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45802565PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-2735355PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix70.92.3e-2227117186
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                +W+ +e+laLi+a+r+++ +l+rg+lk+++W+ev++++          ++p+qC++k+e+l+kry+ + +++++r  s+  s++++f+ ++
  Vun002479  27 CWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVanrcPNASPPKTPVQCRHKMEKLRKRYRSEIQRARSRaVSRFNSSWVHFKLMD 117
                7**********************************99977666677799*************************96699999******997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.5E-2226119No hitNo description
PROSITE profilePS500906.1212888IPR017877Myb-like domain
SMARTSM005951.1E-1035124IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
PPSAVPLALI PLPLPAPPSS RRLPPPCWSP DETLALIDAY RDKWYSLGRG NLKATHWQEV  60
ADAVANRCPN ASPPKTPVQC RHKMEKLRKR YRSEIQRARS RAVSRFNSSW VHFKLMDSME  120
KGPSPVKPEH DSDSDNDDDE NEDDQDLYQE INHNGHTRSL NKLYRNGFPG SGGAGGFRIR  180
IPTGMSPAQP GSGSRMFGKV GNQKFSPNLN QNPNPNSNFG KKRERDPVGE VVAAIKVLGD  240
GFVRMEQMKM EMAREIESMR MEMEMKRTEM ILESQQRIVE AFAKAVSEKK KAKTVSSPQQ  300
P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027921961.10.0trihelix transcription factor ASIL2
TrEMBLA0A4D6KWX20.0A0A4D6KWX2_VIGUN; Uncharacterized protein
STRINGXP_007154189.11e-170(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-61Trihelix family protein