PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun002228 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bHLH | ||||||||||||
Protein Properties | Length: 314aa MW: 35122.4 Da PI: 5.7576 | ||||||||||||
Description | bHLH family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40 | 6.9e-13 | 123 | 174 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr l+P++ + ++ + a+i A++++k+L+ Vun002228 123 QRMTHIAVERNRRKQMNEYLSVLRALMPES---YVQRGDQASIIGGAINFVKELE 174 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.65E-13 | 121 | 178 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-13 | 121 | 178 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.148 | 122 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-16 | 122 | 186 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.5E-10 | 123 | 174 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.1E-9 | 128 | 179 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MALEAVVYPQ PQDPFGSAIK DLYSYNNLLE AAAAANWGYA DFTLQKEDQA SVTFCDNQTE 60 NYSYGEWNSS PPSLLPHTID ASNPPSSETS NAQNNLDSSV STPARTKRRR TKSRKNKEEI 120 ENQRMTHIAV ERNRRKQMNE YLSVLRALMP ESYVQRGDQA SIIGGAINFV KELEQRLQFL 180 GAQKEKEGKA EVPFSEFFSF PQYSTSASGG CDNSAAAMSE QKGEVQSAIA DIEVTMVETH 240 ANLKIRSKKR PKQLLKIVSS LHGMRLTILH LNVTTTEEIV LYSLNVKVEE DCKLGSVDEI 300 AAAVYQMLNR IQQE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 134 | RMTHIAVERNRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027930940.1 | 0.0 | transcription factor bHLH94-like | ||||
Refseq | XP_027930941.1 | 0.0 | transcription factor bHLH94-like | ||||
Swissprot | Q9C7T4 | 2e-80 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A4D6KPZ4 | 0.0 | A0A4D6KPZ4_VIGUN; Transcription factor MYC2 | ||||
STRING | XP_007147072.1 | 0.0 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 8e-78 | bHLH family protein |
Publications ? help Back to Top | |||
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