PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun002116 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | NAC | ||||||||||||
Protein Properties | Length: 320aa MW: 37175.2 Da PI: 6.1887 | ||||||||||||
Description | NAC family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.2 | 1.5e-44 | 34 | 156 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 pG+ td+elv++yL++k++++++ + +ike+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + e+ g+ Vun002116 34 PGLDSTXTDDELVNHYLCRKCAAQSIAA-PIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PEARGI 130 56666779*****************999.88***************6666689*************************************98..6789** PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 kk Lvfy g+apkg+kt+W+mheyrl Vun002116 131 KKALVFYAGKAPKGVKTNWIMHEYRL 156 ************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.03E-53 | 28 | 183 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.851 | 32 | 183 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-21 | 34 | 156 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
XDTQKPELGI VRRETEKTRE ERNRECKENW NYHPGLDSTX TDDELVNHYL CRKCAAQSIA 60 APIIKEIDLY KFDPWQLPDM ALYGEKEWYF FSPRDRKYPN GSRPNRAAGT GYWKATGADK 120 PIGKPEARGI KKALVFYAGK APKGVKTNWI MHEYRLANVD RSASKKNNNL RLDDWVLCRI 180 YNKKGKIEKY NNVDGVVEQK PAKLPEEILF QHEMKPEIQM YDHDHFRNNQ LYMDTSDSVP 240 RLNTDSSCSE HVVSPDGTCE KEVQSEPKWN DLELGPDLVS GYDFNFMELS ADDAFAPQAQ 300 YQMNQPSTWQ DMFAYLPKTF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-74 | 22 | 189 | 5 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027919983.1 | 0.0 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-112 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A4D6L8S8 | 0.0 | A0A4D6L8S8_VIGUN; Uncharacterized protein | ||||
STRING | XP_007159873.1 | 0.0 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-114 | NAC family protein |