PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002089
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 322aa    MW: 36504.8 Da    PI: 5.6188
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45805309PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-4672PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.6e-12146191454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h ++Er+RR+++ ++f  L   +P +     kK +K++iL +A++Y+k+L
  Vun002089 146 DHTMAERKRRQELTERFIALSATIPGL-----KKTDKSSILGEAINYVKEL 191
                599************************.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.996142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.11E-16146209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-9147191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-16147207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.77E-10147195No hitNo description
SMARTSM003533.5E-13148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
XEAPGLNSCG KSSENALYSP MEQAWQNWSH QMEMDDDDDR HEDLMLEECH TEEEEFLREI  60
LGEPSFCSES ETHHHNSTTM APSKRSSSSP RAYILSFDSS TIIPATTPQP PSSSPLSGKK  120
RRQNLNSEQP KPKSTTQKRG RNGSVDHTMA ERKRRQELTE RFIALSATIP GLKKTDKSSI  180
LGEAINYVKE LKERVTELEE RNKRGKESVM IQKKSDVCDS SETDSKDWCR MLPDIEARVM  240
ENEVLIEIHC EKEEGVELKL LDHLENLHLC VTATSVLPFG NSTLGITIIA QMGDAYKMTV  300
KDVVKNLRKV LMNHMNIHGD PY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155ERKRRQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027926734.10.0transcription factor NAI1-like
TrEMBLA0A4D6N6C10.0A0A4D6N6C1_VIGUN; Transcription factor MYC2
STRINGXP_007150795.11e-154(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-40bHLH family protein