PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun001512

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

FAR1

Protein Properties

Length: 363aa MW: 41707.5 Da PI: 10.1941

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45910901	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-28344	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.4	9.2e-08	142	232	7	90
FAR1 7 AkevGFsvrkskskks.......krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Ake GF + + +s++s +rn++ t + C ++gk + k+ +++ +++ +++C +l+ k k + w ++ + HnHel Vun001512 142 AKENGFVLIILRSETStkstrntRRNQRKTFVILGCDRSGKYRGLYKN-ALSQKVNNTRKCECPFRLRGKALKkAEGWTIKVMCGCHNHELE 232 66777776665555554445333566666666667******99999.7888889999999999999998777999***********96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.8E-5	142	232	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
KHTFPLSHTE ALKFVPPLSP SFFPISRVNR VEFVITVSNL RKTPKSELRN VKDESSTRNL 60 RSLNPLVRRS SSGGANASPV KVKDSVVIXP KEEEDRVAKM SNEVNKQIVE ATNKSVDCSD 120 AFNTTEVFPS RDAMLNWARD VAKENGFVLI ILRSETSTKS TRNTRRNQRK TFVILGCDRS 180 GKYRGLYKNA LSQKVNNTRK CECPFRLRGK ALKKAEGWTI KVMCGCHNHE LEETLVGHPY 240 AGRLSAEEKS LVDDMTKNMM KPKDILLTLK DYNMDNVTTI KQIYNARHAY RSSQKGLEMQ 300 YLLKLLERER YVYWYRKVDD SNVIRDIFWT HPDAIKLLGA FNTVLIIDSI YTTTRYPLPL 360 LEX

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

KHTFPLSHTE ALKFVPPLSP SFFPISRVNR VEFVITVSNL RKTPKSELRN VKDESSTRNL  60
RSLNPLVRRS SSGGANASPV KVKDSVVIXP KEEEDRVAKM SNEVNKQIVE ATNKSVDCSD  120
AFNTTEVFPS RDAMLNWARD VAKENGFVLI ILRSETSTKS TRNTRRNQRK TFVILGCDRS  180
GKYRGLYKNA LSQKVNNTRK CECPFRLRGK ALKKAEGWTI KVMCGCHNHE LEETLVGHPY  240
AGRLSAEEKS LVDDMTKNMM KPKDILLTLK DYNMDNVTTI KQIYNARHAY RSSQKGLEMQ  300
YLLKLLERER YVYWYRKVDD SNVIRDIFWT HPDAIKLLGA FNTVLIIDSI YTTTRYPLPL  360
LEX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027906868.1	0.0	PKS-NRPS hybrid synthetase CHGG_01239-like isoform X1
Refseq	XP_027906869.1	0.0	PKS-NRPS hybrid synthetase CHGG_01239-like isoform X1
TrEMBL	A0A0L9VUW1	0.0	A0A0L9VUW1_PHAAN; Uncharacterized protein
STRING	XP_007139082.1	1e-176	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-07	FAR1-related sequence 5