PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001364
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 375aa    MW: 41416.2 Da    PI: 8.0233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45807123PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-9771PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-10177224455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Vun001364 177 SHSLAERVRREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 224
                8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.29E-17171243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.77E-9171228No hitNo description
Gene3DG3DSA:4.10.280.101.5E-17173244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.364173223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-7177224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-9179229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MTVLERQREA TMKWQHHHHD NHQPYCSATE FHVNLVFSSS SNNLPQSQGL AMARERDDSA  60
LSQVLAHSLK PDPGLCPESD NGFGSSSGFL PKENNKKRKA LNCKVAAESD NKEKRVKGSG  120
EEGESRVTNQ TGNRNGKSNA NKNNRETSAD SSKGSEVQNQ KREYIHVRAR RGQATDSHSL  180
AERVRREKIS ERMKYLQDLV PGCNKIAGKA GMLDEIINYV QSLQRQVEFL SMKLAAVNPS  240
IDELFAREVF PSCGQGLPNI GMASDMSMCN NPSYVQLNST QQLVSCFGGL INNVGISPPN  300
VGVRRNLSTT TTHVPLPEAF IDSSCFTQIL PSSNWESDFQ SLYNVAFDQG RASSSSFPSQ  360
PFTGVVEISN PKMEM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19098PKENNKKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027909287.10.0transcription factor bHLH63-like isoform X3
TrEMBLA0A4D6LIZ60.0A0A4D6LIZ6_VIGUN; Phytochrome-interacting factor 3
STRINGXP_007131827.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-51cryptochrome-interacting basic-helix-loop-helix 1