PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun000262
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 301aa    MW: 33971.7 Da    PI: 4.8848
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45867260PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-15427PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.35.5e-1521112187
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                +W+++   +L++a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ ++k+yk +k++ ++ + + ss++p++++l+a
  Vun000262  21 CWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDA 112
                7****************************************99999****************************99999999*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-2519113No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MPDFNDSIAP PSRPVPVRED CWSEEASSTL VDAWGRRYLE LNRGNLRQKD WQDVADAVNA  60
LHGHTKKTHR TDVQCKNRID TIKKKYKIEK ARVSSSNGTL SSSWPFYERL DALIGPNFNA  120
KKPPSSSPSP SPPVALPLLP HRKNPSSSPA IAVTPTAVAL PQKRSAAAAA MDEGYFRRNY  180
SAVAAAAAAA EADEDEEEEE EEEADDVEEE EDEDEGRGSE VEEGEKEREG MRRLAKAIER  240
FGEVYERVEG QKLRQMVDLE KQRMQFAKDL EVQRMQMFMD TQVQLERIKR GKRSGSNDMY  300
S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014518921.10.0trihelix transcription factor ASIL2 isoform X4
RefseqXP_017436567.10.0PREDICTED: trihelix transcription factor ASIL2-like isoform X2
RefseqXP_027932495.10.0trihelix transcription factor ASIL2-like isoform X2
TrEMBLA0A1S3VKN20.0A0A1S3VKN2_VIGRR; trihelix transcription factor ASIL2 isoform X4
STRINGXP_007148047.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-42sequence-specific DNA binding transcription factors