 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi08g03740.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
AP2 |
| Protein Properties |
Length: 284aa MW: 31584.3 Da PI: 7.946 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi08g03740.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 22 | 4.1e-07 | 153 | 173 | 1 | 21 |
AP2 1 sgykGVrwdkkrgrWvAeIrd 21
s+y+GV++++++grW+++I+
Vradi08g03740.1 153 SQYRGVTFYRRTGRWESHIWY 173
78****************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MAMFDLNVDI NHADADSGSS CAQKEVKLQS FPTDISDSRT SNSSVWNPAD EDSSNNSSPL 60
IFDILNKERG GSEFNMEQNM AQKGEMATRT FFPVTSSDKG GRVPDFKSGL WGSTQLLNQS 120
FPESDEKQNE LRTLQQKLPH VRKNRRGPRS RSSQYRGVTF YRRTGRWESH IWYGTCHDLD 180
LSLGISTSSK KLKNCDYGGD YSFGCMPCKI PQEIGTMCEE KSMVERMRSV HLQKFCSNGS 240
IGSRPLQSNA ASSGFVTYQL CQHNSSLTLQ GCGVTLVDQI KPL*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
