PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi07g19270.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 337aa    MW: 37453.5 Da    PI: 6.9632
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi07g19270.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.51.4e-082873261756
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++ 
  Vradi07g19270.1 287 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQN 326
                      89********************************999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147031.27E-16285326No hitNo description
SuperFamilySSF579594.36E-6287330No hitNo description
Gene3DG3DSA:1.20.5.1708.1E-9287330No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MANSKGSSGF RSFMYPGKHA LLPPKSPFPS VSQAYSDYVQ NPAVGLKGVN RPRDGNPHHQ  60
RTSSESLVIE EQPSWLDDLL NEPETPVRRA GHRRSSSDSF AYLDMANASN INYADQDEYK  120
YKSLMSIPSW SSQDFDRSKD ARHLPAYVDM NLSKQINRSW DSFSNAMTNP VGVPSGKDSL  180
TFQSSGLPST PQEADGLPPT ATEKQDSVEP GLQDAKSFSE KKDNSHAKSS SSETDTKRAK  240
QGDASFSFAK SMKLCHNYYG TFKPFPVIIS NSRLYYLCDV HLITQFAQRS RVRKLQYIAE  300
LERNVQALQA EGSEVSAELE FLNQQNLILS EISVNS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi07g19270.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014510006.10.0uncharacterized protein At4g06598
TrEMBLA0A1S3UV980.0A0A1S3UV98_VIGRR; uncharacterized protein At4g06598
STRINGXP_007159569.11e-178(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.23e-80bZIP family protein