PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi07g03990.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 415aa    MW: 45628.8 Da    PI: 10.3538
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi07g03990.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1422.1e-13335388558
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ +  e+k++ ++
  Vradi07g03990.1 335 RRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKN 388
                      79***************************************9999999998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-8331390IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.645333384IPR004827Basic-leucine zipper domain
CDDcd147073.49E-25335389No hitNo description
SuperFamilySSF579593.24E-10335384No hitNo description
Gene3DG3DSA:1.20.5.1702.9E-13335384No hitNo description
PfamPF001703.7E-11335389IPR004827Basic-leucine zipper domain
PROSITE patternPS000360338353IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900057Biological Processpositive regulation of leaf senescence
GO:1903648Biological Processpositive regulation of chlorophyll catabolic process
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MNFRNYDDNN PTWDAMHGKT PAANVGSLLR QPSSVYSLTF DEFQSTMGGV GKEFGSMNMD  60
ELLKNIWTAE ETQALTFSAG TGEGHNLNSI SGGLQRQGSL TLPRTLSQKT VDEVWRDLIK  120
ESGGANDGNG NGNGGSSIPQ RQPTLGEMTL EEFLVRAGVV REDVPQQQQQ IGKPNNNGWF  180
GNFPRPNNNN GLLLGFPQPN RSNGNMGERV VETNNNLAPK QPPPPPLSLN SNHSHRPTQQ  240
PPLFPKPANL AFAAPMHLFN SAPLANPGRR GGLIEHSLNA GLVGLASGNP EASPSRKISS  300
DVITRSNXDN SSLSPVHYSI NRGRKCSAIE KVVERRQRRM IKNRESAARS RARKQAYTFE  360
LEAEVAKLKE INRELQRKQA EIKEMQKNKQ DSDPACHPRV SKIQCLRRTL TGPW*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi07g03990.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022638765.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_022638766.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
SwissprotQ9M7Q44e-97AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A3Q0F5I40.0A0A3Q0F5I4_VIGRR; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
STRINGXP_007156508.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.18e-80abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]