PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vradi07g01500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 199aa MW: 22345.1 Da PI: 10.8694 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.4 | 1.3e-07 | 126 | 149 | 5 | 28 |
CHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaei 28 r r++kNRe+A rsR+RK++ i Vradi07g01500.1 126 MRDARLMKNRESAARSRARKQENI 149 5788*****************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.5E-7 | 122 | 188 | No hit | No description |
CDD | cd14707 | 5.99E-13 | 126 | 188 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 130 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MLSSSSINTT TTTCNRNNLN HQTPTTNNTT NNKAMEDVWD GINLTSLSGH NSDTTPTSKG 60 ANFQDFLARP FNSFTVDTSP VTALTLSTCS EYPPRQKDLQ LVHNASKTEP FAHPFSNKRA 120 PPSRDMRDAR LMKNRESAAR SRARKQENIA SSSTLSFRVS PLFRAYLFEL KQKIKQLREE 180 NARLRKQQQL VPLFPLSL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vradi07g01500.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022640134.1 | 3e-98 | bZIP transcription factor 27-like isoform X2 | ||||
TrEMBL | A0A3Q0FBY6 | 8e-97 | A0A3Q0FBY6_VIGRR; bZIP transcription factor 27-like isoform X2 | ||||
STRING | XP_007156193.1 | 5e-60 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16995 | 7 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 3e-13 | basic region/leucine zipper motif 27 |