PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi05g14040.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 268aa    MW: 29741.1 Da    PI: 10.5441
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi05g14040.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.92.6e-14123171553
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                      +   r +kNRe+A rsR+RK+a  + Le++++ L++eN++L+kel+el+
  Vradi05g14040.1 123 QHHNRIMKNRESAVRSRARKQAHRKGLEDEIARLTEENSRLRKELKELQ 171
                      566799****************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.5E-11117183IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749121171IPR004827Basic-leucine zipper domain
PfamPF001705.6E-11123171IPR004827Basic-leucine zipper domain
CDDcd147071.86E-16125177No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-12126173No hitNo description
SuperFamilySSF579592.0E-10126171No hitNo description
PROSITE patternPS000360127141IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MASPPSKPPH ILFSVREKAM ASSSPCDYWP HLSHSLSSPS SSSPSPSPSS LSQTLLPPPP  60
PPSVEHVWND LKLSSLSNSP VDFNHSSSHS SLLSLSPSHN HHSLLSLSNA SFHSNHTARH  120
RDQHHNRIMK NRESAVRSRA RKQAHRKGLE DEIARLTEEN SRLRKELKEL QFSLSSSENS  180
PQRTSAPYYD GAREEEEGTV LAAWLDVLNG TAAVGIATPP NRASRSPFRR REGNSFAVRR  240
QRSDWSCALL RNLKLWCCSQ KGRRVEG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi05g14040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014500619.11e-125bZIP transcription factor 27 isoform X1
TrEMBLA0A1S3U3P81e-123A0A1S3U3P8_VIGRR; bZIP transcription factor 27 isoform X1
STRINGGLYMA04G02420.11e-49(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1633979
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.13e-10bZIP family protein