PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi03g04520.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 728aa    MW: 81404.3 Da    PI: 7.9797
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi03g04520.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.19.4e-14640690555
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN +L++ l el+  
  Vradi03g04520.1 640 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLRQALAELERR 690
                      79*****************************************99999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF534741.83E-2766163IPR029058Alpha/Beta hydrolase fold
Gene3DG3DSA:3.40.50.18202.2E-3073160IPR029058Alpha/Beta hydrolase fold
PfamPF126976.9E-11100378IPR000073Alpha/beta hydrolase fold-1
Gene3DG3DSA:3.40.50.18202.2E-30204377IPR029058Alpha/Beta hydrolase fold
SuperFamilySSF534741.83E-27207375IPR029058Alpha/Beta hydrolase fold
SMARTSM003388.5E-14636700IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.909638690IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-10640690No hitNo description
CDDcd147071.40E-25640694No hitNo description
Gene3DG3DSA:1.20.5.1708.8E-14640692No hitNo description
PfamPF001701.3E-11640692IPR004827Basic-leucine zipper domain
PROSITE patternPS000360643658IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    Send to blast
MGSGVNRKLS AASTRAHSSN QNKTTSVHFP SGILRTVFAV LFIVLVAWGY QAIQPPPSKL  60
CGSPSGPPIT APRIKLRDGR NLAYKEHGVP KDDVAEDLGV YIVSFDRPGY GESDPHPSQT  120
VKSLALDIEE LADKLGLGSK FYIIGFSLGG QVVWRCLKYI PHRYDAFRFE VWEIGGVIML  180
VYDIKMSGVI VLVIPNYAIL KTLISVLAGA VLIAPVLNYW WTGLPRNLTN EVFYRQKLQD  240
QWTLGVAHYI PWLTYWWNTQ TWFPSSSLIA DSLDLLSLQD KELLPKRKDR KNHVGEVRQQ  300
GEHESVHRDL IVAFGSWEFS PLDLENPFPN KEGLVHIWQG DQDLIVPVKV QRYIAQKLPW  360
IQYHELQGAG HLFPHLDDFV LYVTLLSCGL LKEEGKEMVV EESEMNSQQD GNKNHHSQFP  420
PSSIGRQTSI YSLTLDEFQH SLCETGKNFG SMNMDEFISS VWNAEENQAI ITSSNVPLSQ  480
PFTDKDPTTL RKQPSLPRQP SLSLPPPLSR KTVDEVWSQI QKEQHDSTNN NDVLNNTESA  540
PRQPTFVSNV VAPGYQVGEA SGGYAVNGKR DGGAVFHQQG VSFGGSGYGM GPTMGMGGPV  600
SPANSSDGIG NDCGQFGLEM GGLRGRKRIG DGPVEKVVER RQRRMIKNRE SAARSRARKQ  660
AYTVELEAEL NQLKEENAQL RQALAELERR RKQQIFEELS NISVQANAQK VKEKDKLRAL  720
RRYMSYP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi03g04520.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014494919.10.0uncharacterized protein LOC106756833 isoform X1
RefseqXP_022634989.10.0uncharacterized protein LOC106756833 isoform X1
TrEMBLA0A1S3TMB80.0A0A1S3TMB8_VIGRR; uncharacterized protein LOC106756833 isoform X1
STRINGGLYMA03G35260.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.19e-34bZIP family protein