PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi0269s00030.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 164aa    MW: 18981.4 Da    PI: 10.3594
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi0269s00030.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.2e-09120161546
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                        +r++r++kNRe+A rsR++K++ i +Le++   L++ N  Lk
  Vradi0269s00030.1 120 RRQKRMAKNRESAARSRAKKQEHIHRLENEKCRLQKVNCWLK 161
                        79***************************9999999987776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.887118162IPR004827Basic-leucine zipper domain
CDDcd147071.53E-17120164No hitNo description
PfamPF001701.8E-7120162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.5E-9120161No hitNo description
SuperFamilySSF579591.13E-7120161No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MGFSPNRGQG PQYPPMVRQR SFYNLRFEDV QRPLLGNTGN ESAYLVQDPS CDHHSFTKTS  60
GIGEAWRGIV DHEHMNSQLS YSENSAGIPM SPSYSDSSKT SLFTKRKHSN DEMLEKAVER  120
RQKRMAKNRE SAARSRAKKQ EHIHRLENEK CRLQKVNCWL KKLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi0269s00030.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-108AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014492633.13e-54ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A1S3TFT77e-53A0A1S3TFT7_VIGRR; ABSCISIC ACID-INSENSITIVE 5-like protein 3
STRINGXP_007141121.11e-40(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2417133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-14bZIP family protein