PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vradi0267s00010.1

Organism

Vigna radiata

Taxonomic ID

157791

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

VOZ

Protein Properties

Length: 493aa MW: 55164.5 Da PI: 5.5847

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vradi0267s00010.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	412.9	5.8e-127	239	465	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsafl+pkcalwdc+rpaqg+ew+++ycss+h+ la neglpg+tp+lrp+gi++kdg+lfaa+ ak+qgkevgip+cegaa++kspwna Vradi0267s00010.1 239 PPPSAFLAPKCALWDCFRPAQGVEWCRNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNA 330 89***************************************************************************************9 PP VOZ 93 a..........elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 + e+fdls+lege++rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhlyeyei Vradi0267s00010.1 331 PglkcylfsgaEFFDLSFLEGEAVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEI 422 6555555555589*************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n+ d +alyrlelklv++kks+kgkv+k+sl+dlq+k+g+lta Vradi0267s00010.1 423 NNHDGCALYRLELKLVEKKKSPKGKVTKESLNDLQNKMGQLTA 465 ***************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence Send to blast
MMRESSKGKF GSSSIQSMKE KEKHLVDKIQ GIFXNLQCAR KEGRGSDIVI FEEQMHQLLR 60 EWKAELESPA TSLADGSFDS FTSELALLLQ VIEEKDDATS PLTKPGPLKT ELQTSNISDN 120 NFQFFQEKHF DDNQPLGHNF EGSASTLYNN AFNNSVMEQL DFHPFSLNQD MNHNHVGHNS 180 DLIGQVDLYQ DLGHNTEIKH SEPNQFSIEG FDCSQFFGAE DTVHHGENII PNILPNICPP 240 PSAFLAPKCA LWDCFRPAQG VEWCRNYCSS CHELLANNEG LPGMTPILRP GGIGVKDGPL 300 FAAVLAKTQG KEVGIPSCEG AASTKSPWNA PGLKCYLFSG AEFFDLSFLE GEAVREWLFF 360 DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMKEHGGQK RSYYMDPQPL SYLEWHLYEY 420 EINNHDGCAL YRLELKLVEK KKSPKGKVTK ESLNDLQNKM GQLTAAVLSS DDGIPIKGKT 480 NAKSENDGSP EN*

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence Send to blast

MMRESSKGKF GSSSIQSMKE KEKHLVDKIQ GIFXNLQCAR KEGRGSDIVI FEEQMHQLLR  60
EWKAELESPA TSLADGSFDS FTSELALLLQ VIEEKDDATS PLTKPGPLKT ELQTSNISDN  120
NFQFFQEKHF DDNQPLGHNF EGSASTLYNN AFNNSVMEQL DFHPFSLNQD MNHNHVGHNS  180
DLIGQVDLYQ DLGHNTEIKH SEPNQFSIEG FDCSQFFGAE DTVHHGENII PNILPNICPP  240
PSAFLAPKCA LWDCFRPAQG VEWCRNYCSS CHELLANNEG LPGMTPILRP GGIGVKDGPL  300
FAAVLAKTQG KEVGIPSCEG AASTKSPWNA PGLKCYLFSG AEFFDLSFLE GEAVREWLFF  360
DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMKEHGGQK RSYYMDPQPL SYLEWHLYEY  420
EINNHDGCAL YRLELKLVEK KKSPKGKVTK ESLNDLQNKM GQLTAAVLSS DDGIPIKGKT  480
NAKSENDGSP EN*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vradi0267s00010.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015039	0.0	AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014492703.1	0.0	transcription factor VOZ1-like
Refseq	XP_014492704.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-150	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3TG04	0.0	A0A1S3TG04_VIGRR; transcription factor VOZ1-like
STRING	GLYMA06G43890.3	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-142	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]