PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi0149s00290.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 220aa    MW: 24717.9 Da    PI: 9.8672
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi0149s00290.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.8e-10951301348
                        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Vradi0149s00290.1  95 NRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 130
                        ****************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.5E-785147IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.46E-992139No hitNo description
CDDcd147035.50E-2092138No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-1093138No hitNo description
PfamPF001701.3E-794130IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MAQLPPKVPN MTPNWPDFSS PHQKMPSFKT MAPNISNQNP SWVDEFLDFS AARRGAHRRS  60
VSDSVAFLEA PMLDHHCKSR GSDGGGDNEN EILANRQSAQ RSRVRKLQYI SELERSVTSL  120
QAEVSVLSPR VAFLDHQRLL LNVDNSALKQ RIAALAQDKI FKDAHQEALK REIERLRQVY  180
HQQNIKKMDN AAGSTSQSPL PSPKPRCDTL TEKEQLINV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi0149s00290.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-138AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014524379.17e-83basic leucine zipper 34
RefseqXP_017431606.11e-82PREDICTED: basic leucine zipper 61 isoform X1
RefseqXP_017431608.13e-83PREDICTED: basic leucine zipper 61 isoform X3
SwissprotQ9M2K43e-61BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A078JAF82e-88A0A078JAF8_BRANA; BnaC04g52770D protein
STRINGLus100399025e-88(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2157844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-63bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]