PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi0083s01010.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 546aa    MW: 59198.6 Da    PI: 6.2688
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi0083s01010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-094234612563
                        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        +ae+eeL++kv++L +eN++Lk+e+++l++ ++k++ e+
  Vradi0083s01010.1 423 QAETEELARKVDSLNSENETLKSEINRLTESSEKMRVEN 461
                        89*********************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.7E-34101196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.4E-15231305No hitNo description
PfamPF001708.7E-7423461IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.10007.2E-5427469No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
RGLRLRAPSF PSCHHHHHTP SLCQGTHCCF PRFLERENAH LPSKLIVSPY LDPFFGYLEL  60
PGVFSPCVFM VFFFLARCFV SEDNNWAIGY LVSALYLECT MGNNEEEKST KTEKPSSPAA  120
MDQANQTNQP NIHVYPDWAA MQAYYGQRVT MPPYYNSAVA SGHAPHPYMW GPPQPMMPPY  180
GPPYAAIYSH GGVYPAVPIG PHTHSQGVPS SPAAVTPLSI ETPPKSSGNN DQGLMKKLKE  240
FDGLAMSIGN GHAESAERGG ENRLSPRFDD LVDTEGSSDG SDGNTSGANQ TRRKRSRGGT  300
PTTGEIAEVF ILAISLINVV WGIGVPWLQI AIVEMSHKLK RLILTDGEGK TEIQSSPISK  360
DIAASNKIVA VAPASVAGTI VGPVVSSGMT TVLELRNPSS VHSKANTTSA PQPSVLPAET  420
WLQAETEELA RKVDSLNSEN ETLKSEINRL TESSEKMRVE NATLREKLKI ARLGQTQEIT  480
LNIIDSERAT PVSTENLLSR VNNNSSSIDR TMEDENDFCE NKPNSGAKLH QLLDTSPRAD  540
AVAAG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi0083s01010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311450.0KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014491552.10.0common plant regulatory factor 1-like isoform X4
TrEMBLA0A1S3TCP80.0A0A1S3TCP8_VIGRR; common plant regulatory factor 1-like isoform X4
STRINGGLYMA19G44190.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.18e-37G-box binding factor 3