PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vradi0007s00100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 831aa MW: 90542.7 Da PI: 5.9176 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.1 | 1.8e-13 | 310 | 370 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + kr r+++NRe+A+ sRqRKk ++eeLeekv ++ + +L ++++ + e a+l+++v Vradi0007s00100.1 310 DEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQV 370 5699*******************************************99999999999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-14 | 308 | 372 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.369 | 310 | 370 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.6E-12 | 312 | 370 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.25E-11 | 312 | 370 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.0E-16 | 312 | 370 | No hit | No description |
CDD | cd14704 | 1.30E-20 | 313 | 364 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 831 aa Download sequence Send to blast |
DSFIARDSRS RLLIRTETPK FLKTQTFLLP SRKPSPMTES MHAVEPSPEA ALLPASDPLF 60 DEFSTEFGSL PLMSMDSLFN SDTLPFTSDL EFGMDFDDNN GEFEITFDDL DEICIPSDVE 120 DFLLPDAFNP NNTSVLPPID ESSAKNSDSP RSDTSVVSGD RSSGVSRFFN SQASDSVSEG 180 NSCKEGSHDV ADVRVSNISS PDSEFCDREE SSGGPVSSQG SGNGGSGVYE AVNSPSPDSG 240 SCERDITSSH GHAVMDKGVK LEEISGCDLK RKKVSCEGSA TKHRRFSSSS VETKTEKQTP 300 SDVNAIDDDD EKRKARLMRN RESAQLSRQR KKHYVEELEE KVRSMNSIIA DLSSKISYMV 360 AENATLRQQV GAGVMCAPPP PAPGIYPHPT MAPMTYPWMP CAPYVVKPQG SQVPLVPIPR 420 LKPQQPTSAP RGKKSESKKS EGKTKKVASI SFLGLFFFIM LFGGLVPLVD FKFGGLVDNV 480 PNTGMSSYVS DRVYGQGGGK VWSVNGPRNG SERDEEVGFS NDRFSVKDKM NYERGRHLGE 540 ERGERQGPDD FGRQGNASEP LVASLYVPRN DKMVKIDGNL IIHSIMASEK AMASQTADAK 600 EKRETGLAIP KDWDSALAIP EVGRHPHVYR VPAEQRKALA SGSTKALKDH MKSSATDGKM 660 QQWFREGLAG DYPILWLSLL ILFCIGPMLS SGMCTEVFQF DVSPSPGAIV PATSVSNVST 720 EKRQNATSVK KTRNRRTLNG LPDSLTGSSL NITEEHVKNL QKNHLHANES SMVVSVLVDP 780 KEAGDGDVDG MMRPKSLSRI FVVVLIDSVK YVTYSCGLPR ASPHLVTAYV * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 722 | 735 | RQNATSVKKTRNRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vradi0007s00100.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014491306.1 | 0.0 | bZIP transcription factor 17 | ||||
TrEMBL | A0A1S3TC17 | 0.0 | A0A1S3TC17_VIGRR; bZIP transcription factor 17 | ||||
STRING | XP_007162048.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7487 | 34 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-157 | bZIP family protein |