PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi0007s00100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 831aa    MW: 90542.7 Da    PI: 5.9176
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi0007s00100.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.11.8e-13310370363
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        + kr  r+++NRe+A+ sRqRKk ++eeLeekv ++ +   +L ++++ +  e a+l+++v
  Vradi0007s00100.1 310 DEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQV 370
                        5699*******************************************99999999999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-14308372IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.369310370IPR004827Basic-leucine zipper domain
PfamPF001708.6E-12312370IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.25E-11312370No hitNo description
Gene3DG3DSA:1.20.5.1705.0E-16312370No hitNo description
CDDcd147041.30E-20313364No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 831 aa     Download sequence    Send to blast
DSFIARDSRS RLLIRTETPK FLKTQTFLLP SRKPSPMTES MHAVEPSPEA ALLPASDPLF  60
DEFSTEFGSL PLMSMDSLFN SDTLPFTSDL EFGMDFDDNN GEFEITFDDL DEICIPSDVE  120
DFLLPDAFNP NNTSVLPPID ESSAKNSDSP RSDTSVVSGD RSSGVSRFFN SQASDSVSEG  180
NSCKEGSHDV ADVRVSNISS PDSEFCDREE SSGGPVSSQG SGNGGSGVYE AVNSPSPDSG  240
SCERDITSSH GHAVMDKGVK LEEISGCDLK RKKVSCEGSA TKHRRFSSSS VETKTEKQTP  300
SDVNAIDDDD EKRKARLMRN RESAQLSRQR KKHYVEELEE KVRSMNSIIA DLSSKISYMV  360
AENATLRQQV GAGVMCAPPP PAPGIYPHPT MAPMTYPWMP CAPYVVKPQG SQVPLVPIPR  420
LKPQQPTSAP RGKKSESKKS EGKTKKVASI SFLGLFFFIM LFGGLVPLVD FKFGGLVDNV  480
PNTGMSSYVS DRVYGQGGGK VWSVNGPRNG SERDEEVGFS NDRFSVKDKM NYERGRHLGE  540
ERGERQGPDD FGRQGNASEP LVASLYVPRN DKMVKIDGNL IIHSIMASEK AMASQTADAK  600
EKRETGLAIP KDWDSALAIP EVGRHPHVYR VPAEQRKALA SGSTKALKDH MKSSATDGKM  660
QQWFREGLAG DYPILWLSLL ILFCIGPMLS SGMCTEVFQF DVSPSPGAIV PATSVSNVST  720
EKRQNATSVK KTRNRRTLNG LPDSLTGSSL NITEEHVKNL QKNHLHANES SMVVSVLVDP  780
KEAGDGDVDG MMRPKSLSRI FVVVLIDSVK YVTYSCGLPR ASPHLVTAYV *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1722735RQNATSVKKTRNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi0007s00100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014491306.10.0bZIP transcription factor 17
TrEMBLA0A1S3TC170.0A0A1S3TC17_VIGRR; bZIP transcription factor 17
STRINGXP_007162048.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74873448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-157bZIP family protein