 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Vocar.0029s0186.1.p | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox
|
||||||||
| Family | bZIP | ||||||||
| Protein Properties | Length: 310aa MW: 32843.8 Da PI: 5.076 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 24.2 | 7.5e-08 | 94 | 136 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
+ er NR+A++r+RqRKk++++ L+ v +L+++ ++L
Vocar.0029s0186.1.p 94 TRTERQQVLNRLAQQRYRQRKKEKVQALQSTVGTLQSQLDRLS 136
566788888********************99999888876553 PP
| |||||||
| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.20.5.170 | 1.2E-6 | 91 | 155 | No hit | No description |
| SuperFamily | SSF57959 | 1.59E-6 | 95 | 151 | No hit | No description |
| CDD | cd14686 | 1.63E-6 | 103 | 147 | No hit | No description |
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 310 aa Download sequence Send to blast |
MEDLGLGDPL GSLGADLAGY LEGAGFVGAG LEQPFLGELE AIASRLEMPH SFTEQQDVKA 60 GELPTTSAAD ILSQDDDEEA GRAGQSGPKR RRRTRTERQQ VLNRLAQQRY RQRKKEKVQA 120 LQSTVGTLQS QLDRLSFLEA ENADLRATTQ QLGEQIGVKD AALLQMQQQL RQTCVALKVQ 180 QEKCAAQERQ LTEAQQTMEA QRQQLRSSSL AGLDPQALSD RLLAIIKEAL ADAQSAGGSG 240 GGCSGSSSSQ GGSGGQGQLA QPLSLMSDAV VQRISRTLTS CCRELVYATK GKQAAAAADT 300 PSAIPVSCC* |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_002949831.1 | 0.0 | hypothetical protein VOLCADRAFT_104481 | ||||
| TrEMBL | D8TTW2 | 0.0 | D8TTW2_VOLCA; Uncharacterized protein | ||||
| STRING | XP_002949831.1 | 0.0 | (Volvox carteri) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Chlorophytae | OGCP10396 | 4 | 4 |
| Link Out ? help Back to Top | |
|---|---|
| Phytozome | Vocar.0029s0186.1.p |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|