PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vocar.0015s0075.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox
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Family | bZIP | ||||||||
Protein Properties | Length: 1387aa MW: 138475 Da PI: 7.8608 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.4 | 4.9e-11 | 625 | 668 | 4 | 47 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k+ r++kNR+AAr++R++K a + +e+ keL a+N+++k Vocar.0015s0075.1.p 625 EKARERREKNRIAARKCRAKKVAMVRGMQEELKELVAQNQEMKM 668 57888***********************************9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-11 | 620 | 669 | No hit | No description |
SMART | SM00338 | 1.9E-5 | 622 | 686 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.9E-8 | 624 | 669 | No hit | No description |
PROSITE profile | PS50217 | 9.657 | 624 | 669 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 6.1E-8 | 624 | 667 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14809 | 6.03E-14 | 627 | 669 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 630 | 644 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1387 aa Download sequence Send to blast |
MSALLVTQSH RQPHQRQNRI GQAKSQEQFQ QQQRQQQQGQ QQRPLEQQPQ RQPGAGNCKP 60 SLQTQQQPHQ QLARNPIGPP SFFAPKTRAG EAATATRFDI VSSGPNSAEG SSAGGLQAEV 120 PIGISGPANV AGAPGVQIGV NNGSALENGA ATLRPQSQRQ SAYQVKQSPQ NYVGGGKRKL 180 APRTHVEVAA RCLHSARKKL ARLLSDVLVE EKERLMLFSS AWGHTHAYSA ACRNEIDPPG 240 ALIPPHHQAS SFRRVEPLLP ATMGLNPSPF LLASGGGGGG GGLTAVLPGG GGSSGGGGNG 300 SAIASCIRAT GPSSASGGSR VPAAGAGGSG GGGGGGGGGG SKRKREASTA AAAAVSSRGG 360 GGGGGWGGAG CTSSEAAGKG GGGRRRYFRD RSAVRSVFKN PNHSSSNQTI LTSPALLLPD 420 AGRLLAADGE PPVRSSPRPD GVMFGFSVPY SLDADGSPAV TASTGAGAAT RPPSRSQGLA 480 AVESSTSGGG GGGGGGKEDA GALRPPAAAA AAAPPPGKSP FAVAATAVAA AAAAAAAESG 540 LSNAVLEDVV GVRMAMEAWQ QHHHQHHQQQ QQQRQAFAGL GSNGNDNGNN DPSSELATEG 600 NCLAGEDGEA EGAGEGVEGE DEDPEKARER REKNRIAARK CRAKKVAMVR GMQEELKELV 660 AQNQEMKMQA PPSHEAPRSA ASPSSIPNTA FPAAASRHSS HSSSPPLAPL VLLQVVTWHR 720 MFSREVKLRE AMKRVIFAVW TSNAIRSTGQ WVRPLRLLFG CRIFFGLCFS VYVERLELWV 780 LIRGYTANDV IIGLEAGTLD VNSISAMLQR NAAAAAAVAV GAAAAAGVAL HPPPAAAAAA 840 TALLPAVVGG SSSNGGAPLP PLPPPAAQVI NEPGSLHSAT LRQPPPLLPV SPSAGRVAAA 900 AAAAADQLPS LLPSLHSATA APPAALPVGL PAGSPVSPRL PPPLSPSSDS GGSYWAAAAA 960 SRPYDCVPSP LPPLPLALPN QAHEMPLSPR TRTEQYQTLS PQSPIATAFA TAACQHPSSS 1020 PPPPPPASGS NVSAPTVTTA AAAALGPCSS FSPYTICQDP ASGLDAAAVM AGGGGDGVRA 1080 ASEDSGCEGS AAKADAAAAA ATAVPAPALP HYRHCSAPSN VVTPCDTSPG TALTTLPAPA 1140 PSPAQTIYSG GGAATAATAA GAATGGAAGE GDDGGGGDTQ LLHDAASDDG TMLQLPFLDA 1200 SFSLARLLSL PTAAAAAGGG GGGGLCSSSL PPAPQPLEAI LGTGGGSMRL PSFNLDAAPS 1260 STLLALADPA LLMVRHDSGG MDWLANLQMD AAGGVIAGGC TASADDAAAL AAALTAAAVV 1320 DVVVIILLLL LKPLFCMQWG FEVELDNVAV WRRGPTVGVT SSVSVRVDEG KGCTEGPKCT 1380 AADIAG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 328 | 340 | SGGGGGGGGGGGS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002946811.1 | 0.0 | hypothetical protein VOLCADRAFT_87166 | ||||
TrEMBL | D8TKC6 | 0.0 | D8TKC6_VOLCA; Uncharacterized protein | ||||
STRING | XP_002946811.1 | 0.0 | (Volvox carteri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP8908 | 4 | 4 |
Link Out ? help Back to Top | |
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Phytozome | Vocar.0015s0075.1.p |