PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vocar.0014s0167.1.p

Organism

Volvox carteri

Taxonomic ID

3067

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox

Family

bZIP

Protein Properties

Length: 687aa MW: 69100.1 Da PI: 6.6734

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vocar.0014s0167.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24	8.2e-08	598	654	6	62
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +e +++NR+A++r+R R ++ i+ L+ kv+e +a + L++++ ++ + ++++++ Vocar.0014s0167.1.p 598 KEDSRARNRVAQQRFRNRQRETIAALQAKVDEQDALIRVLQEKVRLYETQHQQHQKQ 654 56669*******************************************999999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14688	2.84E-10	596	643	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.0E-5	598	649	No hit	No description
SuperFamily	SSF57959	2.95E-5	601	653	No hit	No description
PROSITE pattern	PS00036	0	602	615	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence Send to blast
MGDQTAVQLP GTSTDAELEE LYNALPGWHQ QQSLHSGALF GGLARTVSAP CAFLPSASAL 60 SPGNNGPLSM APLKEHSSVA YPCFEEVSSF QKQTPFVARW LLNERPTAGN IPLHNYQHGD 120 EAIADGFSLA SDNRAAPAEA RLWPSRLPSL ATTTVLPPGG ENHTAMTYRL VNPSNCNFEP 180 TNDTNDLNAS HQLSCLQPSR AVPHNNLASS SSGGGNGSRT LGHYVHFNQP HPHSHAFPSP 240 ASTGLSDWPS GGRLIGGSTG LGLLSAASTG TGASVLSDTP SGPYIPSRHG DISGGLPPPP 300 PPPPPPPLPP PSLNATDRSV CGFPNPSPSS TGPAAASPYG GLLGLHAHSH SHSHAVGPGG 360 RGMAAAAAAG GEQGPACGPA VADVRKLEMI SEGAVGTAAE GSMQLDMEQD AHCDGGGRGG 420 GGNGSGSGGG SGGTLQSASS GSSMCAAIDG ALMAAAGCDM SVSADGAGAG AAAMASDGGD 480 GHAIGGDGGN RTGKGSGSAA AAAAAAGGCQ HTSSSINDGR SAPGDSAMDG GGDDGLQLLA 540 MRFRNRPGRV PKAVAKLGPI AELAKSAATG KIKLEKEELQ DLVYTVEMSL ARAVTEQKED 600 SRARNRVAQQ RFRNRQRETI AALQAKVDEQ DALIRVLQEK VRLYETQHQQ HQKQHDGGGG 660 GGGSGGGGGG AKAQGSRGPA RRFPES*

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence Send to blast

MGDQTAVQLP GTSTDAELEE LYNALPGWHQ QQSLHSGALF GGLARTVSAP CAFLPSASAL  60
SPGNNGPLSM APLKEHSSVA YPCFEEVSSF QKQTPFVARW LLNERPTAGN IPLHNYQHGD  120
EAIADGFSLA SDNRAAPAEA RLWPSRLPSL ATTTVLPPGG ENHTAMTYRL VNPSNCNFEP  180
TNDTNDLNAS HQLSCLQPSR AVPHNNLASS SSGGGNGSRT LGHYVHFNQP HPHSHAFPSP  240
ASTGLSDWPS GGRLIGGSTG LGLLSAASTG TGASVLSDTP SGPYIPSRHG DISGGLPPPP  300
PPPPPPPLPP PSLNATDRSV CGFPNPSPSS TGPAAASPYG GLLGLHAHSH SHSHAVGPGG  360
RGMAAAAAAG GEQGPACGPA VADVRKLEMI SEGAVGTAAE GSMQLDMEQD AHCDGGGRGG  420
GGNGSGSGGG SGGTLQSASS GSSMCAAIDG ALMAAAGCDM SVSADGAGAG AAAMASDGGD  480
GHAIGGDGGN RTGKGSGSAA AAAAAAGGCQ HTSSSINDGR SAPGDSAMDG GGDDGLQLLA  540
MRFRNRPGRV PKAVAKLGPI AELAKSAATG KIKLEKEELQ DLVYTVEMSL ARAVTEQKED  600
SRARNRVAQQ RFRNRQRETI AALQAKVDEQ DALIRVLQEK VRLYETQHQQ HQKQHDGGGG  660
GGGSGGGGGG AKAQGSRGPA RRFPES*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	415	421	GGRGGGG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002954684.1	0.0	hypothetical protein VOLCADRAFT_118815
TrEMBL	D8U7M1	0.0	D8U7M1_VOLCA; Uncharacterized protein
STRING	XP_002954684.1	0.0	(Volvox carteri)

Link Out ? help Back to Top
Phytozome	Vocar.0014s0167.1.p