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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang11g18650.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
GRAS |
Protein Properties |
Length: 723aa MW: 81330.6 Da PI: 7.9634 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang11g18650.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 409.8 | 2.5e-125 | 181 | 549 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
+L cA+avs++d a+ + + l +++s +gdp+qRl ay++e+L+arl +s++ +yk+l++++ + s+e l++++++++++P+ kf+++
Vang11g18650.1 181 VLRVCAQAVSDEDVPTARGWMDNvLGKMVSVSGDPIQRLGAYLLEGLRARLESSGHLIYKSLKCEQPT---SKELLSYMHILYQICPYWKFAYIS 272
6788***************997627888***************************************9...9*********************** PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
aN I ea+++e+r+Hi Df+i qG+QW L+qaLa Rp+gppslR+Tgv++++s + le +gerL++fA+++gvpfef++ +a + ++
Vang11g18650.1 273 ANAVITEAMANESRIHIMDFQIAQGTQWYLLIQALAHRPGGPPSLRVTGVDDSHSIqaRGGGLEIVGERLSEFARSCGVPFEFHT-AAMSGCEVV 366
****************************************************7777888899***********************.677777777 PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
+++++pgEalaVn+ + lh++ desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rfle+l+yy+a+f+s+++ pr++++r++
Vang11g18650.1 367 RGSIEIRPGEALAVNFPFVLHHMADESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFYRFLETLDYYTAMFESIDVACPRDDQKRVSA 461
99********************************************************************************************* PP
GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
E+++++r+ivn++acegaer+erhe l+kWr+rl++aGFk+ +ls+++ + ll+ ++++ yr+e+++++l+lgW++r + + SaWr
Vang11g18650.1 462 EQHCVARDIVNMIACEGAERVERHELLGKWRSRLSMAGFKQCQLSSSVIVATQNLLNDFSQN-YRLEHKDDALYLGWMNRHMATSSAWR 549
************************************************************66.*************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 723 aa
Download sequence Send
to blast |
MQTSQKHASS AGVHFYRHQP VQGIYHVLQS DLCHDARHSS SQETSFSFES CKEQYFTLES 60 CPAPTTGFTE CDDSPSYASV SSKRSPFSPQ GSHSCYSDHH QSSDNTYGSP ISGLSSVDDG 120 HELKHKLREL EISLLGPDES DIEDSFGCCV KGSRLDGASQ LAKHNWEQIA ENISRFDLKG 180 VLRVCAQAVS DEDVPTARGW MDNVLGKMVS VSGDPIQRLG AYLLEGLRAR LESSGHLIYK 240 SLKCEQPTSK ELLSYMHILY QICPYWKFAY ISANAVITEA MANESRIHIM DFQIAQGTQW 300 YLLIQALAHR PGGPPSLRVT GVDDSHSIQA RGGGLEIVGE RLSEFARSCG VPFEFHTAAM 360 SGCEVVRGSI EIRPGEALAV NFPFVLHHMA DESVSTENHR DRLLRLVKSL SPKVVTLVEQ 420 ESNTNTSPFF YRFLETLDYY TAMFESIDVA CPRDDQKRVS AEQHCVARDI VNMIACEGAE 480 RVERHELLGK WRSRLSMAGF KQCQLSSSVI VATQNLLNDF SQNYRLEHKD DALYLGWMNR 540 HMATSSAWRM EREEERERRR LRDRQRRQSM TKEQRERHLA RRRRNYQLRR QRAANTPLPP 600 LPQSTSSQPS VTTAGHLRSL PPSIPSQNTL QIIQDTMMNN GASIQMEGFP KRLSVVKRLA 660 RNFGNTKSVM TLDSYHVAPH FISGNSGTTN ILRLNSVKRL ARSLSFPVEK QPSRNIDTVT 720 NS*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 555 | 565 | RERRRLRDRQR |
2 | 557 | 564 | RRRLRDRQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |