PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g01930.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family LFY
Protein Properties Length: 255aa    MW: 28421.6 Da    PI: 8.8783
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g01930.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY1502.5e-4611221115
         FLO_LFY   1 mdpeafsaslfkwdpraaa.....aapparlleeaavseap..leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88 
                     mdp+af+aslfkwdpr++      + pp  ll  a+++++   + + a a  r+l +leelf+ayG+ry+t+akiaelGftvstLvdmkdeeldd
  Vang11g01930.1   1 MDPDAFTASLFKWDPRTVLpaappSRPPPPLLDYAVAPPSVapSYHPARAVPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDD 95 
                     9**************99986443322334444444444333222333344445577*************************************** PP

         FLO_LFY  89 lmkslseifrldllvGeryGikaavra 115
                     +m+sls+ifr+dllvGeryGikaav+a
  Vang11g01930.1  96 MMNSLSQIFRWDLLVGERYGIKAAVQA 122
                     *************************87 PP
2FLO_LFY283.76.1e-87120240266386
         FLO_LFY 266 vqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfn 360
                     vq+iak+rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdee sn+lrrafkergenvGawrqacykplvaiaarqgwdida+fn
  Vang11g01930.1 120 VQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFN 214
                     9********************************************************************************************** PP

         FLO_LFY 361 ahprLsiWYvPtkLrqLChlerskas 386
                     ahprLsiWYvPtkLrqLCh+er++a+
  Vang11g01930.1 215 AHPRLSIWYVPTKLRQLCHAERNTAA 240
                     **********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF016983.2E-501122IPR002910Floricaula/leafy protein
PfamPF016985.0E-84120239IPR002910Floricaula/leafy protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010582Biological Processfloral meristem determinacy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0031490Molecular Functionchromatin DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MDPDAFTASL FKWDPRTVLP AAPPSRPPPP LLDYAVAPPS VAPSYHPARA VPRELGGLEE  60
LFQAYGIRYY TAAKIAELGF TVSTLVDMKD EELDDMMNSL SQIFRWDLLV GERYGIKAAV  120
QAIAKDRGEK CPTKVTNQVF RYAKKAGASY INKPKMRHYV HCYALHCLDE EVSNELRRAF  180
KERGENVGAW RQACYKPLVA IAARQGWDID AIFNAHPRLS IWYVPTKLRQ LCHAERNTAA  240
ASSSVSVGSA HLPF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2vy1_A1e-7912024944173PROTEIN LEAFY
2vy2_A1e-7912024944173PROTEIN LEAFY
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay regulate indeterminacy during leaf and flower development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00095SELEXTransfer from AT5G61850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g01930.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB5887450.0AB588745.1 Vigna unguiculata VuLFY1 mRNA for LEAFY, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004501760.14e-92protein UNIFOLIATA
SwissprotO485598e-91UNI_PEA; Protein UNIFOLIATA
TrEMBLA0A4D8ZXL41e-128A0A4D8ZXL4_SALSN; Uncharacterized protein
STRINGXP_004501760.12e-91(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80333346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.17e-79floral meristem identity control protein LEAFY (LFY)