PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g01750.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 442aa    MW: 48993.1 Da    PI: 6.0552
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g01750.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10251293754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       Er+RR ++ s+f+ L+el+P++      K + a+++  A++YI++L
  Vang11g01750.1 251 TTERQRRVDLSSKFDALKELIPNP-----SKSDRASVVGDAINYIREL 293
                     57*********************9.....79***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.34E-10242297No hitNo description
SuperFamilySSF474591.85E-13242314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.094244293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-11245312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-10250299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-8251293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MRPLLVIWLT HTIPCMRQRS KSLGGPNMYE ESSCFDPNGM VAEDCFSQMV SKSEAVMSVT  60
SIQPQNTFGM ENLAYTYSSG EDASAVAMEI IAHPQQNSYN QVNNLNPQFV QVVNNHGSCE  120
ELYSFPTHSS ALERGHHDHQ FPYSTPTPDL LNLLHLPMTF ENQSSNLPKL SGPMGTADST  180
NVSSVSYDPF LHLNLQAPPP DLRNDFAFGG GGVIEGSGIA YQDFGNGVVE FTQDVGKKRG  240
GKRTKQFTST TTERQRRVDL SSKFDALKEL IPNPSKSDRA SVVGDAINYI RELKRTVDEL  300
KLLVEKKRQE KQRVVVMMRH KVETEGQDGS NPDQDDGSYN ESLRSSWIQR KSKDTEVDVR  360
IVDNEVTIKL VQRKKIDCLV HVSQVLDQLN LDLQHVAGGH IGDFCSYLFN TKMCDGSCVY  420
ASAIANKLIQ VMDTSLAAVS S*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g01750.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017433924.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A0L9TN610.0A0A0L9TN61_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R3F50.0A0A0S3R3F5_PHAAN; Uncharacterized protein
STRINGXP_007156379.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.16e-82bHLH family protein