PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang07g02980.1
Common NameLR48_Vigan06g023700
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 175aa    MW: 20349 Da    PI: 10.6219
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang07g02980.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.3e-1075134564
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                     ++ rr+++NR +ArrsR RK+  +e+L++ +  +  eN++L +  + l  ++ +l++e+e
  Vang07g02980.1  75 RKRRRMISNRDSARRSRMRKQRHLENLRNQMNLFRVENRELNNGFQFLLHHCNRLRTENE 134
                     6789************************************************99999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-1071135IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.02573136IPR004827Basic-leucine zipper domain
PfamPF001702.0E-874134IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.39E-1075127No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-875147No hitNo description
CDDcd147029.92E-1676127No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MLSHLTSSDS LLGNAFPAFD YALAPWDGLD FLAFNPTSPN PVTSSSASDD PKTTPADQKP  60
PSDQSNRVVS FTEERKRRRM ISNRDSARRS RMRKQRHLEN LRNQMNLFRV ENRELNNGFQ  120
FLLHHCNRLR TENEWLRSER TMLRQKLADI NQILLFRQLQ PFSTAWPCNI VMTE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17478RKRRR
28794RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang07g02980.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017427037.11e-126PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A0L9UQE11e-124A0A0L9UQE1_PHAAN; Uncharacterized protein
TrEMBLA0A0S3T5071e-124A0A0S3T507_PHAAN; Uncharacterized protein
STRINGXP_007156692.14e-94(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.19e-28basic leucine-zipper 5
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]