PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang07g02170.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 673aa    MW: 75020.7 Da    PI: 7.5517
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang07g02170.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.51.5e-15202248455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Vang07g02170.1 202 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 248
                     6*************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-20195259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-19195258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.86198247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.11E-15201252No hitNo description
PfamPF000105.2E-13202248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-18204253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.200.203.5E-13436482No hitNo description
PfamPF077141.9E-8439515IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamilySSF561129.39E-34439620IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.102.4E-17513620No hitNo description
PfamPF077141.8E-7516618IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 673 aa     Download sequence    Send to blast
MPFFLFLFLF HKFLKVVGCI TIYYFLSQHT ETKSTKPPQL NPSLHSSFFS AHTPVGMGDM  60
YHFDKNLSSQ DEISLFLRQI LLRSSPSSSS SPHSVPGSCN SNISHQNVNS HASFTPSHLQ  120
HGKISNLGST ASFVSPSGTC GSFKAQTASA ANVSSSSVLV SENENDDYDC ESEEGVEALA  180
EELPTKPIPS RNSSKRSRAA EVHNLSEKRR RSRINEKMKA LQNLIPNSNK TDKASMLDEA  240
IEYLKQLQLQ VQMLSMRNGL TLHPMCFPEG LQPLQLSQMG MELSERNRST TLNMTATLPL  300
HQENPLHYTS NLPSKHILPN QPSAPYPSFI NNPETSFGLE SRIQPETKPL QHKGGPSGPI  360
RGEDILHYQQ PSAIHSDANT LGTTVSLSFD TQTCEPCIGR REQSGMIIRN SEANIVVTSQ  420
LSSNPLLHRR PNNKIDNRRG QAEKEFKVEV EAIGRVRHKN LVRLLGYCAE GAHRMLVYEY  480
VDSGNLEQWL HGDVGPYSPL TWEIRMNIIL GTAKGYVAPE YASTGMLNER SDVYSFGILI  540
MEVLTGRNPV DYSRPPEEVN LVDWLKKMVS NRNPEGVLDP KLPEKPTSRA LKRALLVALR  600
CTDPNAQKRP KMGHVIHMLE AEDSPYKEDR RARKDAGHSP NDRVGDGLKE EADVSVDDPK  660
LETRTNPQIE KQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5tos_A9e-31434620106350Serine/threonine-protein kinase BIK1
5tos_B9e-31434620106350Serine/threonine-protein kinase BIK1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang07g02170.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017426114.10.0PREDICTED: transcription factor SPATULA isoform X2
TrEMBLA0A0S3T4R70.0A0A0S3T4R7_PHAAN; Uncharacterized protein
STRINGGLYMA11G05810.11e-174(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22763379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-39bHLH family protein