PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0763s00020.2

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 427aa MW: 48134 Da PI: 8.4411

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0763s00020.2	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.8	8.6e-12	129	163	3	36
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee.kvk 36 ++k+ rr ++NReAAr++R+RKka++++Le+ +vk Vang0763s00020.2 129 DSKVLRRQAQNREAARKCRLRKKAYVQQLETsRVK 163 6899*************************962444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.5E-8	123	173	No hit	No description
SMART	SM00338	2.8E-4	126	187	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.76	129	164	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.0E-9	130	166	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.48E-7	132	164	No hit	No description
PROSITE pattern	PS00036	0	134	149	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.1E-27	219	292	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0042742	Biological Process	defense response to bacterium
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence Send to blast
MRFGGLTSAP FSRRGARGGG SRLMQQFTAA RFYQTSYPVI LISVLNCIWI AQYMNSSSTQ 60 LVLAKRMGIY DPFHQVNMWG DSFKIDGSLN SIATPMFMMK PSMQNKPECT PHESREPSGD 120 DQESNEKTDS KVLRRQAQNR EAARKCRLRK KAYVQQLETS RVKLMQLELE IEKAKKQGMY 180 IRSAPDVSYM GSSGTINPGI ALFELEYGQW IEELDRQNEE LRNALHTRDS DMQLHLLVES 240 CLSHYSNLFR MKAEAAKADV FYMISGTWKA SVERLYLWIG GSRPSQLLNI IVPQLEPLTD 300 QQIVSINKLR LSSQQAEDAL SLGLDKLQQS LVHNIPSDPV AIGHYGFEMA AAMDKGEALE 360 GFVNQLVPQA DHLRQQTLLY MSRILTPGQT AQGLVAMGEY FHRLRTLSSL WSAHSCDPSF 420 PTHLSN*

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence Send to blast

MRFGGLTSAP FSRRGARGGG SRLMQQFTAA RFYQTSYPVI LISVLNCIWI AQYMNSSSTQ  60
LVLAKRMGIY DPFHQVNMWG DSFKIDGSLN SIATPMFMMK PSMQNKPECT PHESREPSGD  120
DQESNEKTDS KVLRRQAQNR EAARKCRLRK KAYVQQLETS RVKLMQLELE IEKAKKQGMY  180
IRSAPDVSYM GSSGTINPGI ALFELEYGQW IEELDRQNEE LRNALHTRDS DMQLHLLVES  240
CLSHYSNLFR MKAEAAKADV FYMISGTWKA SVERLYLWIG GSRPSQLLNI IVPQLEPLTD  300
QQIVSINKLR LSSQQAEDAL SLGLDKLQQS LVHNIPSDPV AIGHYGFEMA AAMDKGEALE  360
GFVNQLVPQA DHLRQQTLLY MSRILTPGQT AQGLVAMGEY FHRLRTLSSL WSAHSCDPSF  420
PTHLSN*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269\|PubMed:12953119}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00247	DAP	Transfer from AT1G77920	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0763s00020.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017429280.1	0.0	PREDICTED: transcription factor TGA7-like
Swissprot	Q93ZE2	1e-128	TGA7_ARATH; Transcription factor TGA7
TrEMBL	A0A0L9UZG1	0.0	A0A0L9UZG1_PHAAN; Uncharacterized protein
STRING	XP_007141120.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-130	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]