PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0763s00020.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 431aa    MW: 48604.5 Da    PI: 8.446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0763s00020.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.7e-12129163336
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee.kvk 36 
                       ++k+ rr ++NReAAr++R+RKka++++Le+ +vk
  Vang0763s00020.1 129 DSKVLRRQAQNREAARKCRLRKKAYVQQLETsRVK 163
                       6899*************************962444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-8123173No hitNo description
SMARTSM003382.8E-4126187IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.76129164IPR004827Basic-leucine zipper domain
PfamPF001707.1E-9130166IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.55E-7132164No hitNo description
PROSITE patternPS000360134149IPR004827Basic-leucine zipper domain
PfamPF141443.9E-26219290IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MRFGGLTSAP FSRRGARGGG SRLMQQFTAA RFYQTSYPVI LISVLNCIWI AQYMNSSSTQ  60
LVLAKRMGIY DPFHQVNMWG DSFKIDGSLN SIATPMFMMK PSMQNKPECT PHESREPSGD  120
DQESNEKTDS KVLRRQAQNR EAARKCRLRK KAYVQQLETS RVKLMQLELE IEKAKKQGMY  180
IRSAPDVSYM GSSGTINPGI ALFELEYGQW IEELDRQNEE LRNALHTRDS DMQLHLLVES  240
CLSHYSNLFR MKAEAAKADV FYMISGTWKA SVERLYLWIG GSRPSQLLNV HPHIIVPQLE  300
PLTDQQIVSI NKLRLSSQQA EDALSLGLDK LQQSLVHNIP SDPVAIGHYG FEMAAAMDKG  360
EALEGFVNQL VPQADHLRQQ TLLYMSRILT PGQTAQGLVA MGEYFHRLRT LSSLWSAHSC  420
DPSFPTHLSN *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0763s00020.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-159AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429280.10.0PREDICTED: transcription factor TGA7-like
SwissprotQ93ZE21e-126TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A0L9UZG10.0A0A0L9UZG1_PHAAN; Uncharacterized protein
STRINGXP_007141120.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-128bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]