PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0733s00050.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 394aa    MW: 42850.7 Da    PI: 8.2498
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0733s00050.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88.4e-13327372655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri  ++ +L++l Pk+    +k  s a++L +AveYIk+Lq
  Vang0733s00050.1 327 SIAERERRTRISARIKKLQDLFPKS----DKQTSTADMLDLAVEYIKDLQ 372
                       689*********************9....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.259321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-14324383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.15E-12325376No hitNo description
Gene3DG3DSA:4.10.280.104.1E-14326382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-10327372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-11327377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
LPFGILVLNF PGSIGDQGNC GDKMSIVYSH AVKYSQEQQQ SYHPSTSSEM ETMLAKLISS  60
DDSEPLQEFG GKPVKEEAGD SGYSFGSSPQ IMYQTQQVQG FSMPNGSLRP AGNGFDGSFS  120
AVNSMASQNS TQTKMVASTN CSNLIRQKSS PAGFFSNYSV DNTMREVGSF RGCDVSNGQA  180
IASGSGLHGT LNFSSRISSS SCSTRMPQIA ENGNEVVEPN CVESRNLRND SGNTKCYMPS  240
FTSDFWDGSA ISASRTATNN CEISFSTSNA MDIQNADFGY QKLGLTHHLS LPSSSTRMTT  300
MEKLYQTQGT VPCKIRAKRG FATHPRSIAE RERRTRISAR IKKLQDLFPK SDKQTSTADM  360
LDLAVEYIKD LQKQVKMLAD TRAKCTCTSN QKQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0733s00050.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017410493.10.0PREDICTED: transcription factor bHLH130-like
RefseqXP_017410494.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A0L9TGT40.0A0A0L9TGT4_PHAAN; Uncharacterized protein
TrEMBLA0A0S3S8R00.0A0A0S3S8R0_PHAAN; Uncharacterized protein
STRINGXP_007133842.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-39bHLH family protein