 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang06g16490.4 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
bHLH |
| Protein Properties |
Length: 352aa MW: 38765.5 Da PI: 5.2841 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang06g16490.4 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.8 | 5.3e-05 | 300 | 320 | 35 | 55 |
TS-STCHHHHHHHHHHHHHHH CS
HLH 35 skKlsKaeiLekAveYIksLq 55
s++ +Ka++L +A+eY+ksLq
Vang06g16490.4 300 SERSDKASMLDEAIEYLKSLQ 320
67889***************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MLDCFNNFEI QMDDDEEFPI PVSKKPSMQN DEIMELLWQN GQVVMHSQNH RPLRKPPHTL 60
VAGGVSPARD IRSSEAENYG NQHLFMQEDE MASWLHYPIH EDPPPFDHHD FSADMLNPPP 120
TNEIASVTHN SAAIQSSFRT TELRHPAPRP PIPPSRRPVP AANRMQNFSH FSNHGNSSSS 180
SKATAAQPTV VDSCETPVAT AEHAETGRAS VTAADAGKVA ESGRRETATC DVTVTSSPGG 240
SSGSAEPVQR ELDRKRKGRE PEESEFLSED VDFESPEAKK QGRGSTSTKR SRAAEVHNLS 300
ERSDKASMLD EAIEYLKSLQ LQVQAMNQPN VSKPSTSRGQ ENPEKHQSEE T*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
