 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang06g16490.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
bHLH |
| Protein Properties |
Length: 358aa MW: 39422.3 Da PI: 5.5461 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang06g16490.3 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.7 | 5.4e-05 | 306 | 326 | 35 | 55 |
TS-STCHHHHHHHHHHHHHHH CS
HLH 35 skKlsKaeiLekAveYIksLq 55
s++ +Ka++L +A+eY+ksLq
Vang06g16490.3 306 SERSDKASMLDEAIEYLKSLQ 326
67889***************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
LLQQSKMNHC VPDFEIQMDD DEEFPIPVSK KPSMQNDEIM ELLWQNGQVV MHSQNHRPLR 60
KPPHTLVAGG VSPARDIRSS EAENYGNQHL FMQEDEMASW LHYPIHEDPP PFDHHDFSAD 120
MLNPPPTNEI ASVTHNSAAI QSSFRTTELR HPAPRPPIPP SRRPVPAANR MQNFSHFSNH 180
GNSSSSSKAT AAQPTVVDSC ETPVATAEHA ETGRASVTAA DAGKVAESGR RETATCDVTV 240
TSSPGGSSGS AEPVQRELDR KRKGREPEES EFLSEDVDFE SPEAKKQGRG STSTKRSRAA 300
EVHNLSERSD KASMLDEAIE YLKSLQLQVQ AMNQPNVSKP STSRGQENPE KHQSEET*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
