PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g16040.1
Common NameLR48_Vigan02g148300
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 84aa    MW: 9528.84 Da    PI: 6.2429
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g16040.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.38.2e-141411050
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                    +++NRe+ArrsR RK++++e+L+e++  L++eN  L++ ++
  Vang06g16040.1  1 MESNRESARRSRMRKQKQLENLTEEASRLQNENVHLAQSIK 41
                    689********************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001708.7E-11141IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-11141No hitNo description
SMARTSM003381.5E-5158IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.875141IPR004827Basic-leucine zipper domain
CDDcd147021.40E-15140No hitNo description
SuperFamilySSF579595.5E-10141No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MESNRESARR SRMRKQKQLE NLTEEASRLQ NENVHLAQSI KVGDLSVEIP QIPDLLFNPW  60
QIPHPMMASP DMFLHGTEGL FAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g16040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150412e-65AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017413453.12e-48PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A0L9TXL95e-47A0A0L9TXL9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SR155e-47A0A0S3SR15_PHAAN; Uncharacterized protein
STRINGXP_007145149.15e-41(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.16e-15basic region/leucine zipper motif 53
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]