PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g10070.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 346aa    MW: 38459.1 Da    PI: 6.3543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g10070.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.5e-10127157131
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkas 31 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P ++
  Vang06g10070.1 127 QRMTHIAVERNRRKQMNEYLSVLRSLMPDSY 157
                     79**************************964 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.83E-8125163No hitNo description
Gene3DG3DSA:4.10.280.107.1E-9125160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.801126178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.72E-9126163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-7127157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MALEAVVFSQ SQDPFGGYGS VKDFYNCTFL AATSPNWGDY EHININIHKE EEQGSISTFL  60
DNSNNQPDNY PYGGDWTSSS SSILPHLNDL QEATDPSNAT HSLDTLTTRP KRRRAKSRKN  120
KEEIENQRMT HIAVERNRRK QMNEYLSVLR SLMPDSYIQR ELEQRLHFLG AQKEGERKSD  180
AGGATNMPFS EFFAFPQYST SGGGGGSDNS ATVGEDVGEV KSGIADIEVT MVESHANLKI  240
RSKKRPKQLL KLVSGLHTMR LTILHLNVTT TGEIVLYSLS VKVEDDCKLG SVDDIAEAVY  300
QTLDRIQQEA CLVNFAHFAL KLVGLVYLNY KPKPNCQAEI GSISK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127138RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g10070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017438702.10.0PREDICTED: transcription factor bHLH94-like
TrEMBLA0A0L9VJ070.0A0A0L9VJ07_PHAAN; Uncharacterized protein
STRINGXP_007144754.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-66bHLH family protein