PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang06g07670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 283aa MW: 31682 Da PI: 5.3298 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.6 | 3.6e-15 | 159 | 204 | 3 | 48 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 + +r+rr++kNRe+A rsR+RK+a++ eLe + +Le+eN++L ke Vang06g07670.1 159 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKE 204 679****************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.6E-13 | 157 | 222 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.45 | 159 | 204 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.0E-13 | 159 | 204 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 9.25E-18 | 161 | 203 | No hit | No description |
SuperFamily | SSF57959 | 3.25E-11 | 161 | 210 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-13 | 162 | 205 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 164 | 179 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
LMASSKLMAS SHSRNSESSS PSPTPQFTTT NFIPISDAAV TAAPKTVDDV WREIVAGDRR 60 ECKEEAPDDE MMTLEDFLAK AGAVDDDNNE EVDCDMKIPM PLTERLGSGV FAFDPLLAAT 120 PFQDGVEGSV IGFGNGVEVV EGGRGKRARP VLEQLDKAAQ QRQRRMIKNR ESAARSRERK 180 QAYQVELESL AVKLEEENDK LLKEKGLVFT ANTFEFGMFL QAFWVANSPH FGLYSKTEDV 240 TYFIVQAERK KERYKQLMEK VLPVAQKQKP PCILRRARSL QW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang06g07670.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017415662.1 | 1e-165 | PREDICTED: G-box-binding factor 4-like isoform X1 | ||||
TrEMBL | A0A0S3SNB4 | 1e-164 | A0A0S3SNB4_PHAAN; Uncharacterized protein | ||||
STRING | XP_007143550.1 | 1e-148 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 2e-40 | bZIP family protein |